Protein Alignment Rbp4 and tardbp

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: XP_012821726.1
• Gene: tardbp / 394651
• XenbaseID: XB-GENE-974453
• Length: 418
• Species: Xenopus tropicalis
• Alignment Length: 349
• Identity: 81/349 - (23%)
• Similarity: 130/349 - (37%)
• Gaps: 84/349 - (24%)

  Fly    18 DGKTAIK-EEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYV 81
            |..:|:| :........:.:.||..:||.:.|:.:||.||.|....|.:|..:.||:|||||.:.
 Frog    99 DASSAVKIKRAVTKTSDLIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAKTGHSKGFGFVRFA 163

  Fly    82 DPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEY 146
            |.:: ::...::.|.||.:..:.|  ||........               |.|:::|:|...|.
 Frog   164 DYET-QVKVMSQRHMIDGRWCDCK--LPNSKSPDEP---------------MRSRKVFVGRCTED 210

  Fly   147 HDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEK---------------ALAP 196
            .....:|::|||:|.|..|.:     ....|||.|:.|.|...|:.               :.|.
 Frog   211 MSAEELRQFFSQYGEVVDVFI-----PKPFRAFAFVTFADDQVAQSLCGEDLIIKGVSVHVSTAE 270

  Fly   197 RKHWILQTLVEVKRSTQKADRRFRFPIFSSVRAGYIPPQPAT-------------ADSYNYNNPN 248
            .||          .:.::.:|..|||..|....||...:|::             ....|:...:
 Frog   271 PKH----------NNNRQLERGGRFPGPSFGNQGYPNSRPSSGALGNNQGGNMGGGGGMNFGAFS 325

  Fly   249 YNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHG---PDMWSSYP 310
            .||  |......:|..:.|..            ..|.||..:|...:.|..|.|   .|...|:.
 Frog   326 INP--AMMAAAQAALQSSWGM------------MGMLASQQNQSGPQGSNQGQGNQQRDQPQSFG 376

  Fly   311 KTGIYSAQEWTSSKVAEWG-PKAG 333
            ....|.    ::|....|| |.||
 Frog   377 SNNSYG----SNSGAIGWGSPNAG 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	25/76 (33%)
		RRM2_hnRNPA_like	137..209	CDD:240774	20/86 (23%)
tardbp	XP_012821726.1	RRM	<87..232	CDD:223796	41/155 (26%)
		RRM1_TDP43	115..191	CDD:240767	26/78 (33%)
		RRM	<190..>299	CDD:223796	29/138 (21%)
		RRM2_TDP43	200..270	CDD:240768	17/74 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910