Sequence 1: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_988923.1 | Gene: | hnrnpa0 / 394519 | XenbaseID: | XB-GENE-1000573 | Length: | 309 | Species: | Xenopus tropicalis |
Alignment Length: | 365 | Identity: | 107/365 - (29%) |
---|---|---|---|
Similarity: | 157/365 - (43%) | Gaps: | 81/365 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 LRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPH 95
Fly 96 TIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFG 160
Fly 161 PVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRS------TQKADRRF 219
Fly 220 RFPIFSSVRAGYIPPQPATADSYNYNNPNYNPYLAQSVLPPS----AFTNGWAHYVIPMAPKPTP 280
Fly 281 GQNMAASLPSQQLAEHSLNGHGPDMWSSYPKTGIYSAQEWTSSKVAEWGPKAGHKHAQTSTNDRA 345
Fly 346 KIDLKELQAATFNNKLDFGA-RGDADRMSGAGLGLGLTGG 384 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 34/76 (45%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 29/71 (41%) | ||
hnrnpa0 | NP_988923.1 | RRM1_hnRNPA0 | 10..88 | CDD:240772 | 34/76 (45%) |
RRM2_hnRNPA0 | 104..183 | CDD:241023 | 31/78 (40%) | ||
HnRNPA1 | 255..>275 | CDD:314495 | 6/49 (12%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |