Protein Alignment Rbp4 and msi2b

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_957403.1
• Gene: msi2b / 394084
• ZFINID: ZDB-GENE-040426-1268
• Length: 408
• Species: Danio rerio
• Alignment Length: 372
• Identity: 106/372 - (28%)
• Similarity: 163/372 - (43%)
• Gaps: 90/372 - (24%)

  Fly    16 KGDGKTAIK---EEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGF 77
            :|||..|..   .:......|:||||||.||:.::||.:||:||.:.:.:|:|||.:..||||||
Zfish     2 EGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGF 66

  Fly    78 VTYVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGG 142
            ||:.|..||:.|.....|.:|:|.::.|.|.||:...:               ....:|:||:||
Zfish    67 VTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPK---------------MVTRTKKIFVGG 116

  Fly   143 LKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVE 207
            |........|::||.|||.|....|:.|:.|.|.|.|||:.|.:....||......|.|...:||
Zfish   117 LSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181

  Fly   208 VKRSTQKADRRFRFPIFSSVRAGYIP---------------PQ-PAT--------ADSYNYNNPN 248
            .|::..|   ...||..:..||..:|               |. .||        |.||:|..|.
Zfish   182 CKKAQPK---EVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQFPG 243

  Fly   249 YNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMWSSYPKT- 312
            :         |.:|:.        |:|        .||::.:.:.:.....|.|.  :::||::
Zfish   244 F---------PATAYG--------PVA--------AAAAVAAARGSGRGARGRGG--YAAYPQST 281

  Fly   313 -------GIYSA---QEWTSSKVAEW---GPKAGH----KHAQTSTN 342
                   |.||:   |.......|::   ||:|..    :||.::.|
Zfish   282 GPGFPDYGFYSSPSDQRGPPFSFADYGSLGPQAAQLLQSEHATSACN 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	36/76 (47%)
		RRM2_hnRNPA_like	137..209	CDD:240774	27/71 (38%)
msi2b	NP_957403.1	RRM	<2..162	CDD:223796	64/174 (37%)
		RRM1_MSI	23..97	CDD:241020	34/73 (47%)
		RRM2_MSI	111..184	CDD:240769	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910