Sequence 1: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335234.1 | Gene: | hnrnpa1a / 393467 | ZFINID: | ZDB-GENE-040426-1546 | Length: | 445 | Species: | Danio rerio |
Alignment Length: | 229 | Identity: | 74/229 - (32%) |
---|---|---|---|
Similarity: | 115/229 - (50%) | Gaps: | 46/229 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 TAIKEEGY-----EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAV------------------ 62
Fly 63 ----------VLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGG 117
Fly 118 GVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFL 182
Fly 183 EFVDPSSAEKALAPRKHWILQTLVEVKRSTQKAD 216 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 40/104 (38%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 22/71 (31%) | ||
hnrnpa1a | XP_021335234.1 | RRM_SF | 36..144 | CDD:327398 | 42/107 (39%) |
RRM_SF | 157..233 | CDD:327398 | 24/75 (32%) | ||
HnRNPA1 | 376..>392 | CDD:314495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |