Protein Alignment Rbp4 and SLIRP1

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001027083.1
• Gene: SLIRP1 / 3772560
• FlyBaseID: FBgn0064117
• Length: 90
• Species: Drosophila melanogaster
• Alignment Length: 77
• Identity: 23/77 - (29%)
• Similarity: 45/77 - (58%)
• Gaps: 1/77 - (1%)

  Fly    22 AIKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSV 86
            |:.:.| :.:.:||:|.|......:.|||:|.:||.|..|.|:.|..:..|:|:|||::....::
  Fly     6 AVAKVG-KSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTAL 69

  Fly    87 EIVQRARPHTID 98
            |.::..:.|.::
  Fly    70 EKIENEQKHILE 81

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	21/66 (32%)
		RRM2_hnRNPA_like	137..209	CDD:240774
SLIRP1	NP_001027083.1	RRM_SLIRP	16..88	CDD:409688	21/66 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464009
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930