Protein Alignment Rbp4 and Sxl

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Alignment Length: 421
• Identity: 76/421 - (18%)
• Similarity: 129/421 - (30%)
• Gaps: 120/421 - (28%)

  Fly     1 MDAGNCASSACLGDCKGDGKTAIKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLR 65
            |.:.|..::.|.......|...:..:.......:.:..|....|...|...|...|.:....::|
  Fly    86 MASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMR 150

  Fly    66 DPVSNHSRGFGFVTYV-DPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCE 129
            |..:.:|.|:.||.:. :..|...::.....|:.||.::..:|.|       ||..
  Fly   151 DYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP-------GGES--------- 199

  Fly   130 AGFMNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
               :....:::..|.....::.:...|.::|.:....:|.|:.|||.|...|:.:.....|::|:
  Fly   200 ---IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 261

  Fly   195 APRKHWI----LQTL-VEVKRSTQKADRRFRFPIFSSVRAGYIPPQP------ATA--------- 239
            :...:.|    .|.| |.:.....||...........|.|...||.|      |.|
  Fly   262 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRDGA 326

  Fly   240 ------------------DSYN--------YNNPNYNPYLAQSVLPPSAFTNGWAHYVIPMAPKP 278
                              ||.|        |....:.|||..
  Fly   327 MEKLRSLFDAICDAIFGLDSENFADLLDGLYRRKYHYPYLXL----------------------- 368

  Fly   279 TPGQNMAASLPSQQLAEHSL--------------NGHGPD--MWSSYPKTGIYSAQEWTSSKVAE 327
            ||.|       .|||.:|..              ||:|.|  |...:.:   |..|:....::
  Fly   369 TPQQ-------QQQLLQHQQQALGFTSSSNNSIGNGNGNDNNMLLYHQQ---YHQQQTQQQRL-- 421

  Fly   328 WGPKAGHKHAQTSTNDRAKIDLKELQAATFN 358
             |..|.|..:...:|:  .|:........||
  Fly   422 -GNVAAHNISPNGSNN--NINTSNTNNINFN 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	16/77 (21%)
		RRM2_hnRNPA_like	137..209	CDD:240774	16/76 (21%)
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	17/86 (20%)
		RRM2_Hu_like	203..281	CDD:240822	16/77 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.920