Protein Alignment Rbp4 and tra2

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Alignment Length: 148
• Identity: 37/148 - (25%)
• Similarity: 59/148 - (39%)
• Gaps: 32/148 - (21%)

  Fly   135 SKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKA------ 193
            |:.|.:.||.....::.|||.|:::||:..:::::|.:|.|.|.|.|:.|...|.|..|
  Fly    96 SRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSG 160

  Fly   194 -------------LAPRKHWILQTLVEVKRSTQKADRRFRFPIFSSVRAG-------YIPPQPAT 238
                         :..|.|.....:...::...||.|.|      |.|.|       ...|....
  Fly   161 IEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSF------SPRRGRRVYHDRSASPYDNY 219

  Fly   239 ADSYNYNNPNYNPYLAQS 256
            .|.|:|.|..|:..|.:|
  Fly   220 RDRYDYRNDRYDRNLRRS 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621
		RRM2_hnRNPA_like	137..209	CDD:240774	21/90 (23%)
tra2	NP_476764.1	RRM	<74..242	CDD:223796	37/148 (25%)
		RRM_TRA2	98..175	CDD:240809	19/76 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910