Protein Alignment Rbp4 and Caper

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 295
• Identity: 66/295 - (22%)
• Similarity: 112/295 - (37%)
• Gaps: 82/295 - (27%)

  Fly    32 RKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIV-----QR 91
            |.:|...||.:.....|..|||..|.|.|..::....:...:|..::.:.||:||.:.     ||
  Fly   237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQR 301

  Fly    92 AR------PHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDEN 150
            ..      .||...| ...::|.|.  |:.....|.:              |:::|.|.....|:
  Fly   302 LLGVPIMVQHTQAEK-NRLQNAAPA--FQPKSHTGPM--------------RLYVGSLHFNITED 349

  Fly   151 IVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQ-TLVEVKRSTQK 214
            ::|..|..||.:.:::|:||.||||.:.:||:.:.:...|:|||.....:.|. .|::|...|::
  Fly   350 MLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTER 414

  Fly   215 ADR---------------------RFRFPIFSSVRAGYIPPQPATADSYNYNNPNYNPYLAQSVL 258
            .|.                     |.:.....:..||...||.|
  Fly   415 LDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAA--------------------- 458

  Fly   259 PPSAFTNGWAHYVIPMAPKPTP--GQNMAASLPSQ 291
                     |:.::..||:|.|  .|.:|.|:.:|
  Fly   459 ---------ANALLATAPQPAPLQQQEVAPSIATQ 484

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	21/87 (24%)
		RRM2_hnRNPA_like	137..209	CDD:240774	23/72 (32%)
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	17/71 (24%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	22/71 (31%)
		RBM39linker	425..500	CDD:292157	15/90 (17%)
		RRM3_RBM39_like	483..567	CDD:240731	1/2 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463945
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930