Protein Alignment Rbp4 and Secp43

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Alignment Length: 397
• Identity: 74/397 - (18%)
• Similarity: 148/397 - (37%)
• Gaps: 93/397 - (23%)

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAV-VLRDPVSNHSRGFGFVTYV-DPKSVEIVQRARPH 95
            ::::|.|.:..|...:...|.:.|.....| ::|:..:....|:.||.:: |..:::.:     |
  Fly     7 QLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAM-----H 66

  Fly    96 TIDNKIVETKHALPRQDFKRGGGVGSVVGSF---GCEAGFMNSKRIFLGGL-KEYHDENIVREYF 156
            .::.|.:...:.:.|  |:    :.|...|:   |.|..|    .:::|.| .:..|..:.:.:.
  Fly    67 KLNGKPIPGTNPIVR--FR----LNSASNSYKLPGNEREF----SVWVGDLSSDVDDYQLYKVFS 121

  Fly   157 SQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKADRRFRF 221
            |:|..:.:.|:::| ..|..:.:||:.|......:.||.....:|......:|
  Fly   122 SKFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIK------------ 173

  Fly   222 PIFSSVRAGYIPPQPATA---------DSYNYNN-------PNYNPYLAQSVLPPSAFTNG---W 267
             |.::|      |:|.:.         .:|.|.:       .:|:.|..    |.|.:..|   |
  Fly   174 -ICNAV------PKPKSELGGAVGEGNTNYGYGSGMTAAGGTDYSQYYD----PTSTYWQGYQAW 227

  Fly   268 AHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMWSSYPKTGIYSAQEWTSSKVAEWGPKA 332
            ..|........|.    ||:...|.:::...|          |:|....|:.|::.:.|::..:.
  Fly   228 QGYYEQAGASITD----AAAYYQQAMSQSHSN----------PQTLAQHAEAWSAQRSAQYEQQQ 278

  Fly   333 GHKHAQTSTNDRAKIDLKELQAATFNNKLDFGARGDADRMSGAGLGLGLTGGAAVGVGAIKKW-P 396
            ..:.|..:.....:..|.|.:.....:||:..|. ||||.....|             ...|| |
  Fly   279 QQQTASAANGAEDENGLVEHKFVLDVDKLNREAI-DADRRLYDAL-------------ESSKWLP 329

  Fly   397 TQDYKVF 403
            .:..:||
  Fly   330 IEQLEVF 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	13/78 (17%)
		RRM2_hnRNPA_like	137..209	CDD:240774	14/72 (19%)
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:241054	16/93 (17%)
		RRM2_SECp43	99..180	CDD:241056	18/104 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463931
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930