DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp4 and hnrnpa0l

DIOPT Version :9

Sequence 1:	NP_476935.1	Gene:	Rbp4 / 41668	FlyBaseID:	FBgn0010258	Length:	428	Species:	Drosophila melanogaster
Sequence 2:	NP_001268650.1	Gene:	hnrnpa0l / 321899	ZFINID:	ZDB-GENE-030131-618	Length:	302	Species:	Danio rerio

Alignment Length:	186	Identity:	71/186 - (38%)
Similarity:	109/186 - (58%)	Gaps:	13/186 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    31 LRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPH 95
            |.|:|:|||:.|||.|.||..|.|:|.:.|.||:.:.....||.||||||...:..:....||||
Zfish     5 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEADAAMSARPH 69

  Fly    96 TIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFG 160
            .:|...|:.|.|:.|:|..:...:..|             |:||:||||:..::..:::||||||
Zfish    70 IVDGNNVDLKRAVAREDAGKPEMLAKV-------------KKIFVGGLKDDIEDEHLQDYFSQFG 121

  Fly   161 PVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKAD 216
            |:...:::.|::||::|.|||:.|.|..||:||:..:.|.|....||||::..|.:
Zfish   122 PIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQE 177

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	33/76 (43%)
Rbp4	NP_476935.1	RRM2_hnRNPA_like	137..209	CDD:240774	30/71 (42%)
hnrnpa0l	NP_001268650.1	RRM1_hnRNPA0	4..82	CDD:240772	33/76 (43%)
hnrnpa0l	NP_001268650.1	RRM_SF	98..177	CDD:302621	33/78 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920