Sequence 1: | NP_476935.1 | Gene: | Rbp4 / 41668 | FlyBaseID: | FBgn0010258 | Length: | 428 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112556.2 | Gene: | HNRNPAB / 3182 | HGNCID: | 5034 | Length: | 332 | Species: | Homo sapiens |
Alignment Length: | 364 | Identity: | 89/364 - (24%) |
---|---|---|---|
Similarity: | 142/364 - (39%) | Gaps: | 112/364 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 AGNCASSACLGD---CKGDGKTAIKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVL 64
Fly 65 RDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTIDNKIVETKHALP-RQDFKRGGGVGSVVGSFGC 128
Fly 129 EAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKA 193
Fly 194 LAPRKHWILQTLVEVKRSTQKADRRFRFPIFSSVRAGYIPPQPATADSYNYN------------- 245
Fly 246 ------NPNYNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPD 304
Fly 305 MWS-SYPKTGIYSAQEWTSSKVAEWGPKAGHKHAQTSTN 342 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp4 | NP_476935.1 | RRM_SF | 33..110 | CDD:302621 | 30/77 (39%) |
RRM2_hnRNPA_like | 137..209 | CDD:240774 | 23/71 (32%) | ||
HNRNPAB | NP_112556.2 | CBFNT | 1..70 | CDD:311868 | 9/31 (29%) |
RRM1_hnRNPAB | 66..145 | CDD:410151 | 31/80 (39%) | ||
RRM2_hnRNPAB | 150..229 | CDD:409997 | 26/99 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |