Protein Alignment Rbp4 and tcg1

DIOPT Version :10

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_595090.2
• Gene: tcg1 / 2541062
• PomBaseID: SPBC660.11
• Length: 349
• Species: Schizosaccharomyces pombe
• Alignment Length: 234
• Identity: 46/234 - (19%)
• Similarity: 80/234 - (34%)
• Gaps: 75/234 - (32%)

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSR----GFGFVTY-----VDPKSVE- 87
            ::|:|.|||.|....:|..|...|.|....:....|...:|    |..|||:     || |::|
pombe    46 RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVD-KAIET 109

  Fly    88 -----------IVQRARP------------HTIDNKIVETKHALPRQDFKRGGG----VGSVVGS 125
                       :||:|||            ...:.:..||..::...:..:|..    ..:....
pombe   110 LNGKTLDDREIVVQKARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDENEANTATAP 174

  Fly   126 FGCEAGFMNSKR---------------------IFLGGLKEYHDENIVREYFSQFGP-------- 161
            ...||..::.|:                     |::.||........::|.|..:.|
pombe   175 SSNEANGVDKKQNEIKGKGGSGKNKAKPLPPNSIYVSGLSVTLTNEGLKEMFDAYNPTRARIAVR 239

  Fly   162 ------VASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
                  :..:||..::..|  |.|||:.|.:.....:|:
pombe   240 SLPPYIIRRIKLRGEQRRG--RGFGFVSFANAEDQSRAI 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	34..105	CDD:473069	26/103 (25%)
		RRM2_hnRNPA_like	137..209	CDD:409766	15/93 (16%)
tcg1	NP_595090.2	PABP-1234	<33..>300	CDD:130689	46/234 (20%)