DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp4 and SPBC4F6.14

DIOPT Version :9

Sequence 1:	NP_476935.1	Gene:	Rbp4 / 41668	FlyBaseID:	FBgn0010258	Length:	428	Species:	Drosophila melanogaster
Sequence 2:	NP_596114.1	Gene:	SPBC4F6.14 / 2540871	PomBaseID:	SPBC4F6.14	Length:	674	Species:	Schizosaccharomyces pombe

Alignment Length:	174	Identity:	48/174 - (27%)
Similarity:	79/174 - (45%)	Gaps:	28/174 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    34 IFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRA----RP 94
            :|:..|:.||..:.|..|||..|.:..|||:.:|.:..:||:||||:   ..:|..|||    :.
pombe     7 LFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTF---SMLEDAQRAAKELKN 68

  Fly    95 HTIDNKIVETKHALPRQ----DFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGL-----KEYHDEN 150
            ..:..:|:....|.||:    |..:...|...:..       .|..|:.:..|     |..|
pombe    69 KKLHGRILRLDFATPRKRSEVDTDQNKAVKKTIRQ-------DNRPRLIIRNLPWSIKKPQH--- 123

  Fly   151 IVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
             :..:||:||.|..:| :..:..||...|.|:...|..:||:|:
pombe   124 -LEPHFSKFGKVREIK-IPTKGGGRMCGFAFVWMKDRKAAEEAM 165

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	25/79 (32%)
Rbp4	NP_476935.1	RRM2_hnRNPA_like	137..209	CDD:240774	18/63 (29%)
SPBC4F6.14	NP_596114.1	RRM1_Nop4p	6..84	CDD:241118	25/79 (32%)
		RRM2_Nop4p	107..189	CDD:241119	18/64 (28%)
		RRM3_RBM28_like	278..384	CDD:240861
		RRM4_Nop4p	458..614	CDD:241121
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910