Protein Alignment Rbp4 and rnp-9

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 39/166 - (23%)
• Similarity: 82/166 - (49%)
• Gaps: 18/166 - (10%)

  Fly    34 IFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVE-IVQRARPHTI 97
            :|:|.||...:.|.|:..|::||.|::|.|:||..:..|:|:|||::.:.::.| .:.......|
 Worm    89 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWI 153

  Fly    98 DNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSK----RIFLGGLKEYHDENIVREYFSQ 158
            ..:.|.|..|..:...:....:     :|  |..|.::|    .:::|.:.:...:..:|:.||.
 Worm   154 GKRAVRTNWAARKNSEENRDKL-----TF--EQVFNSTKADNTSVYVGNISQQTTDADLRDLFST 211

  Fly   159 FGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
            :|.:|.|::.      :.:.:.|:.:.....|.||:
 Worm   212 YGDIAEVRIF------KTQRYAFVRYEKKECATKAI 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	24/76 (32%)
		RRM2_hnRNPA_like	137..209	CDD:240774	11/58 (19%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:240799	23/72 (32%)
		RRM3_TIA1_like	189..260	CDD:240800	11/59 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910