Protein Alignment Rbp4 and Msi1

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_032655.1
• Gene: Msi1 / 17690
• MGIID: 107376
• Length: 362
• Species: Mus musculus
• Alignment Length: 356
• Identity: 105/356 - (29%)
• Similarity: 140/356 - (39%)
• Gaps: 80/356 - (22%)

  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97
            |:||||||.|||.|.||.:|.|||.|.:.:|:|||::..||||||||::|...|:.|.....|.:
Mouse    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85

  Fly    98 DNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPV 162
            |:|.::.|.|.||:...:               ....:|:||:|||........|:.||.|||.|
Mouse    86 DSKTIDPKVAFPRRAQPK---------------MVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135

  Fly   163 ASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRS--------TQKADRRF 219
            ....|:.|:.|.|.|.|||:.|......||......|.|...:||.|::        |..|..|.
Mouse   136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRS 200

  Fly   220 R-FP------IFSSVRAGYIPPQPAT---------ADSYNYNNPNY----NPYLAQSVLP----- 259
            | .|      :......||...|..|         |..|.|..|.:    :|..:..|||
Mouse   201 RVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPEFRVERSPLPSAPVLPELTAI 265

  Fly   260 -------------PSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMWSSYPK 311
                         .:|...|...:...|||.|       .|.||:       .|......|..|.
Mouse   266 PLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPP-------GSTPSR-------TGGFLGTTSPGPM 316

  Fly   312 TGIYSAQEWTSS-----KVAEWGPKAGHKHA 337
            ..:|.|....|.     ..|...|..|..|:
Mouse   317 AELYGAANQDSGVSSYISAASPAPSTGFGHS 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	38/76 (50%)
		RRM2_hnRNPA_like	137..209	CDD:240774	27/71 (38%)
Msi1	NP_032655.1	RRM1_MSI	22..96	CDD:241020	36/73 (49%)
		PABP-1234	<32..312	CDD:130689	87/308 (28%)
		RRM2_MSI	110..183	CDD:240769	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910