DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp4 and Rbp6

DIOPT Version :10

Sequence 1:NP_476935.1 Gene:Rbp4 / 41668 FlyBaseID:FBgn0010258 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_061499213.1 Gene:Rbp6 / 1277242 VectorBaseID:AGAMI1_006135 Length:383 Species:Anopheles gambiae


Alignment Length:339 Identity:95/339 - (28%)
Similarity:139/339 - (41%) Gaps:89/339 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHS------------------RGFGFVT 79
            |:||||||.||:.|:||.:||:||.:.:.:|::||.:..|                  |||||:|
Mosquito    25 KMFIGGLSWQTSPESLRDYFSKFGEITEVMVMKDPTTRRSSSSAMGLADSSAPLYSRPRGFGFIT 89

  Fly    80 YVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLK 144
            :.||.||:.|.....|.:|.|.::.|.|.||:...:               ....:|:||:|||.
Mosquito    90 FGDPASVDKVLAHGTHELDGKKIDPKVAFPRRAHPK---------------MVTRTKKIFVGGLS 139

  Fly   145 EYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVK 209
            .......|:.||.||||:....|:.|::|.|.|.|||:.|......:|......|.|...:||.|
Mosquito   140 APTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECK 204

  Fly   210 RS-------------TQKADR--------------RFRFPIFSSVRAG--------YIPPQPATA 239
            ::             |:.|.|              .|....:::..||        :..|.|...
Mosquito   205 KAQPKEVMLPANLAKTRTAGRGTYDFMWSLGTLPDGFPAAAYAAYAAGRGFSGYPSFGLPYPTVD 269

  Fly   240 DSYNYNNPNYN-PYLAQSV-------LPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEH 296
            .:.....||.| |.|.|::       ...:|...|:.    |.|...|.....||..|       
Mosquito   270 ITNGQLTPNNNTPLLTQALSVMNNYQAAAAAAAQGFG----PPASPHTTTTRTAAGFP------- 323

  Fly   297 SLNGHGP--DMWSS 308
            :.|..||  ||:||
Mosquito   324 NANSPGPTIDMYSS 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp4NP_476935.1 RRM_SF 34..105 CDD:473069 33/88 (38%)
RRM2_hnRNPA_like 137..209 CDD:409766 26/71 (37%)
Rbp6XP_061499213.1 None

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