Protein Alignment Rbp4 and msi2

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: XP_004911774.1
• Gene: msi2 / 100038158
• XenbaseID: XB-GENE-488852
• Length: 407
• Species: Xenopus tropicalis
• Alignment Length: 364
• Identity: 110/364 - (30%)
• Similarity: 154/364 - (42%)
• Gaps: 78/364 - (21%)

  Fly     1 MDA-GNCASSACLGDCKGDGKTAIKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVL 64
            |:| |:.|:|....|.:.|.            .|:||||||.||:.::||.:|::||.:.:.:|:
 Frog     1 MEADGSQATSGSPNDSQHDP------------GKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVM 53

  Fly    65 RDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCE 129
            |||.:..||||||||:.||.||:.|.....|.:|:|.::.|.|.||:...:
 Frog    54 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPK-------------- 104

  Fly   130 AGFMNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL 194
             ....:|:||:|||........|::||.|||.|....|:.|:.|.|.|.|||:.|......||..
 Frog   105 -MVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVC 168

  Fly   195 APRKHWILQTLVEVKRSTQKADRRFRFPIFSSVRAGYIP---------------PQ--------- 235
            ....|.|...:||.|::..|   ...||..:..||..:|               |.
 Frog   169 EIHFHEINNKMVECKKAQPK---EVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY 230

  Fly   236 PATADSYNYNNPN------YNPYLAQSV-------LPPSAF--TNGWAHYVIPMAPKPTPGQNMA 285
            |..|.||:|..|.      |.|..|.:|       :|...|  |.|.....:..|...:.|...|
 Frog   231 PGFAPSYSYQFPGFPAAAAYGPVAAAAVAAARGSGIPDYGFYTTPGDQRATLSFADYGSMGPRTA 295

  Fly   286 ASLPSQQLAE------HSLNGHGPDMWSSYPKTGIYSAQ 318
            ..|.|:..|.      |.|  ..||.:.|......||||
 Frog   296 QMLRSEHAASASNSPLHHL--PSPDQFKSPAVLNSYSAQ 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	36/76 (47%)
		RRM2_hnRNPA_like	137..209	CDD:240774	27/71 (38%)
msi2	XP_004911774.1	RRM	<2..162	CDD:223796	66/186 (35%)
		RRM1_MSI	23..97	CDD:241020	34/73 (47%)
		RRM2_MSI	111..184	CDD:240769	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910