Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014518.1 | Gene: | HRP1 / 853997 | SGDID: | S000005483 | Length: | 534 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 439 | Identity: | 117/439 - (26%) |
---|---|---|---|
Similarity: | 174/439 - (39%) | Gaps: | 120/439 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 DTEINGEDFTKDVTADGPGSENGDAGAAGS------------TNGSSDNQSAAS------GQRDD 54
Fly 55 DR----------KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEA 109
Fly 110 IDKVSAADEHIINSKKVDPKKAKARH-----GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPF 169
Fly 170 DKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMM---GGMRGGPRGGM 231
Fly 232 RGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGGYGAGGYG---------DYY--AGGYY------N 279
Fly 280 GYDYG-------------YDGYGYGGGF--------EGNGYGG------------------GGGG 305
Fly 306 NMGGGRGGPRGGGGPKG----------GGGFNGGKQRGGGGRQQRHQPY 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 32/70 (46%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 22/73 (30%) | ||
HRP1 | NP_014518.1 | PABP-1234 | <144..463 | CDD:130689 | 94/334 (28%) |
RRM1_Hrp1p | 161..236 | CDD:409991 | 35/75 (47%) | ||
RRM2_Hrp1p | 244..321 | CDD:409767 | 24/76 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157343283 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |