Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001328758.1 | Gene: | AT4G14300 / 827071 | AraportID: | AT4G14300 | Length: | 411 | Species: | Arabidopsis thaliana |
Alignment Length: | 408 | Identity: | 135/408 - (33%) |
---|---|---|---|
Similarity: | 184/408 - (45%) | Gaps: | 128/408 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADE 118
Fly 119 HIINSKKVDPKKAKARH-------------------------GKIFVGGLTTEISDEEIKTYFGQ 158
Fly 159 FGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMMGG- 222
Fly 223 -MRGGPRGGMRG------------------------------GRGGYGGRGGYNNQWDGQGSYGG 256
Fly 257 YGGGYGGYGAG---------------------------------GYGD--YYAGGYYNGYDY--- 283
Fly 284 --------GYDGYGYG-GGFEG--NGYG--------GG---GGGNMGGGRGGPRGGGGPKG---- 322
Fly 323 ------GGGFNGGKQRGG 334 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 33/70 (47%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 29/73 (40%) | ||
AT4G14300 | NP_001328758.1 | RRM1_hnRNPA_hnRNPD_like | 8..78 | CDD:409763 | 33/70 (47%) |
RRM2_Hrp1p | 111..188 | CDD:409767 | 31/76 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |