DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment sqd and AT2G22100

DIOPT Version :9

Sequence 1:	NP_731825.1	Gene:	sqd / 41666	FlyBaseID:	FBgn0263396	Length:	344	Species:	Drosophila melanogaster
Sequence 2:	NP_565526.1	Gene:	AT2G22100 / 816745	AraportID:	AT2G22100	Length:	382	Species:	Arabidopsis thaliana

Alignment Length:	247	Identity:	67/247 - (27%)
Similarity:	95/247 - (38%)	Gaps:	49/247 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    49 SGQRD-DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112
            |..|| ..|.:||.||.|:||.:.|:..|..||||...:|..|..|||::||.|::|...:....
plant   155 SADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARA 219

  Fly   113 VSAADEHIINSKKVDPKKAKARHGKIFVGGLTTEISD--EEIKTYFGQFGNIVEVEMP------- 168
            .....|..:.::.|....|:.     |..|...|...  |.:|......||..|:.:|
plant   220 ALKNPEKRMYNRTVSCLPARP-----FNSGKPREQQQPVESVKIDLSHTGNQSEMALPGIDLGHG 279

  Fly   169 FDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVD-VKRATPKPE-NQMMGGMRGGPR-GG 230
            .||...|::..                   ...||:.:. ...:.|.|. |.|.|.|.|.|. .|
plant   280 LDKGHQQQQNM-------------------SMYAGQNMPFYGHSQPPPGFNPMYGAMMGNPMVAG 325

  Fly   231 MRGGR---GGYGGRG--------GYNNQWDGQGSYGGYGGGYGGYGAGGYGD 271
            ::..|   .|...:|        |...|:.|.|:..|.|.| .|.|||..|:
plant   326 LQNYRMFGSGMMNQGPMMPPNHMGMVGQYVGDGNVNGVGAG-AGAGAGFDGE 376

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	24/70 (34%)
sqd	NP_731825.1	RRM2_hnRNPD_like	137..211	CDD:240775	14/83 (17%)
AT2G22100	NP_565526.1	PABP-1234	<164..>353	CDD:130689	52/212 (25%)
AT2G22100	NP_565526.1	RRM_SF	165..235	CDD:418427	24/69 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	3	2.870