Protein Alignment sqd and UBA1A

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_850021.1
• Gene: UBA1A / 816744
• AraportID: AT2G22090
• Length: 347
• Species: Arabidopsis thaliana
• Alignment Length: 341
• Identity: 82/341 - (24%)
• Similarity: 117/341 - (34%)
• Gaps: 88/341 - (25%)

  Fly    37 STNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAF 101
            ||..||.:.|:.|...:.|.         |...:|||:....|.:.:.:::........|..::.
plant    37 STPYSSSSSSSDSSDSESDN---------EFDPEELRELLQPYSKDQLVDLVCSASRIGSSIYSA 92

  Fly   102 IVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVE 166
            :          |.|||..:             .|.||||.||..|.:.|.:...|..:|.|.|..
plant    93 V----------VEAADRDV-------------THRKIFVYGLPWETTRETLVGVFEGYGEIEECT 134

  Fly   167 MPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMMGGMRGGPRGGM 231
            :..||...:.|||.|:.|.:.:...:.||.||::|..:....:.|:..|.....|..:.||....
plant   135 VVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAASGKGHDQPGPVKIS 199

  Fly   232 RGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGG------------YGAGGYGD------YYAGGYY 278
            .|....:    |...|...||.:...|||...            ||||..|:      ..|||
plant   200 MGSMANH----GQPQQQQVQGQHVFNGGGMAASPFMLGNQYHPLYGAGMLGNPALAAAAAAGG-- 258

  Fly   279 NGYDY-------GYDGYG--------YGGGFEGNGYGGGGGGNMG--------------GGRGGP 314
             ||.|       .:.|.|        .||.......|..|...:|              ...||.
plant   259 -GYMYPMLAGALAHGGLGSDMVQSSQMGGIGVDPSVGAAGLSALGSYFRGQSLPSTYPDSDAGGK 322

  Fly   315 RGGG--GPKGGGGFNG 328
            ||.|  ...||..|:|
plant   323 RGTGKDSDAGGSSFHG 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	10/70 (14%)
		RRM2_hnRNPD_like	137..211	CDD:240775	24/73 (33%)
UBA1A	NP_850021.1	RRM_SF	104..179	CDD:418427	24/74 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910