Protein Alignment sqd and Rbm31y

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_083246.1
• Gene: Rbm31y / 74484
• MGIID: 1921734
• Length: 565
• Species: Mus musculus
• Alignment Length: 226
• Identity: 78/226 - (34%)
• Similarity: 114/226 - (50%)
• Gaps: 35/226 - (15%)

  Fly     1 MAENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSW 65
            :|..|..:||...|.|..|.|                     .||..||       |:|:||||.
Mouse     6 LAVEKDNETEQFREGFKIDAT---------------------KNQQDAS-------KMFIGGLSQ 42

  Fly    66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKK 130
            |.:::.|.::..|:|||....:||||.||.||||.|::|.::..::||....:|.::.||::.|:
Mouse    43 EMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLFKDSATVEKVLQVKDHKVDGKKIEFKR 107

  Fly   131 AKARHG-----KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
            |||...     |||||||...:|:|:|:.|||.||.|..:|:|......:|:.|.||.:..|..|
Mouse   108 AKALESQFPNKKIFVGGLNPRLSEEKIRAYFGTFGQIEAIELPLCSDTRERRAFGFIKYMDENSV 172

  Fly   191 TDLLKTPKQKIAGKEVDVKRATPK--PENQM 219
            ..:|:.....|.....:||.|.||  |..|:
Mouse   173 RKVLENRYHFIGSSRCEVKMAYPKENPARQL 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	28/70 (40%)
		RRM2_hnRNPD_like	137..211	CDD:240775	28/73 (38%)
Rbm31y	NP_083246.1	RRM_SF	35..108	CDD:302621	29/72 (40%)
		RRM_SF	119..193	CDD:302621	28/73 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	70	1.000	Domainoid score	I9500
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1055256at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm43940
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	7	6.880