Protein Alignment sqd and Dazap1

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_001365924.1
• Gene: Dazap1 / 70248
• MGIID: 1917498
• Length: 407
• Species: Mus musculus
• Alignment Length: 427
• Identity: 121/427 - (28%)
• Similarity: 162/427 - (37%)
• Gaps: 155/427 - (36%)

  Fly    49 SGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
            |...|:..|||||||.|.||::.||.:|.:|||:....:..|..|.:||||.|:.|.:...:..|
Mouse     3 SAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

  Fly   114 SAADEHIINSKKVDPK----------KAKARHG-------------KIFVGGLTTEISDEEIKTY 155
            .|:..|.::.:.:|||          :.:.:.|             ||||||:.....:.|::.|
Mouse    68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREY 132

  Fly   156 FGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMM 220
            |.:||.:.||.|.:|.:|.:.:||.||||:.||.|...:......|.||:|:||||.|:......
Mouse   133 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQA 197

  Fly   221 GGMRGGPRGGMR-------GGRG--------GYGGRGGYNNQWDGQG-SYGGYG----------- 258
            .|..|..:.|.|       |..|        |||.:|    .|...| :.||||
Mouse   198 PGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQG----MWVPAGQAIGGYGPPPAGRGAPPP 258

  Fly   259 -------------GGY-------GGYGAG-----GYG------DYYAG----------------- 275
                         ||:       .||||.     |||      |.:|.
Mouse   259 PPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAF 323

  Fly   276 -----------------------GYYNGYDYGYDGYGYGGGF-----EGNGYGGGGGGNMGGGRG 312
                                   |.|.|  ||.|..|:|.||     :...|         ||..
Mouse   324 PPPPSQAAPDMSKPPTAQPDFPYGQYAG--YGQDLSGFGQGFSDPSQQPPSY---------GGPS 377

  Fly   313 GPRGGGGPKGGGGFNGGKQRGGGGRQQRH-----QPY 344
            .|..||.|.||.||         ||.|.|     .||
Mouse   378 VPGSGGPPAGGSGF---------GRGQNHNVQGFHPY 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	27/70 (39%)
		RRM2_hnRNPD_like	137..211	CDD:240775	31/73 (42%)
Dazap1	NP_001365924.1	RRM1_DAZAP1	11..92	CDD:409988	30/80 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	74..117		6/42 (14%)
		RRM2_DAZAP1	111..190	CDD:409765	33/78 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810