Protein Alignment sqd and dazl

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_571599.1
• Gene: dazl / 58039
• ZFINID: ZDB-GENE-000405-6
• Length: 229
• Species: Danio rerio
• Alignment Length: 83
• Identity: 25/83 - (30%)
• Similarity: 43/83 - (51%)
• Gaps: 6/83 - (7%)

  Fly    58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHII- 121
            |||||:..:..|.|:|:.|.|||.::.:.:.| .:.|..:|:.|:.|  :|.:|..:..|:.|.
Zfish    49 LFVGGIDMKVDENEIREFFAKYGSVKEVKIIT-YRGGICKGYGFVYF--SEDVDIQTIVDQPISF 110

  Fly   122 --NSKKVDPKKAKARHGK 137
              ...|:.|...|.|..:
Zfish   111 KGKKLKLGPAIMKERSSR 128

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763	22/73 (30%)
		RRM2_hnRNPD_like	137..211	CDD:240775	0/1 (0%)
dazl	NP_571599.1	RRM_DAZL	42..123	CDD:410073	23/76 (30%)
		PABP-1234	<47..203	CDD:130689	25/83 (30%)