Protein Alignment sqd and DAZ4

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_001375413.1
• Gene: DAZ4 / 57135
• HGNCID: 15966
• Length: 723
• Species: Homo sapiens
• Alignment Length: 278
• Identity: 60/278 - (21%)
• Similarity: 102/278 - (36%)
• Gaps: 103/278 - (37%)

  Fly    20 VTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKL-----FVGGLSWETTEKELRDHFGKY 79
            ::|..|.:.|.......||..||  .:|:.|....:.|:     ||||:.....|.|:...||:|
Human     1 MSAANPETPNSTISREASTQSSS--AAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRY 63

  Fly    80 GEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSK-KVDP----KKAKARH---- 135
            |.::.:.:.|: :||.|:|:.|:.|.|...:.|:..:..|....| |:.|    :|..|||
Human    64 GSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPR 127

  Fly   136 ----------------------------------------------------------------- 135
                                                                             
Human   128 PLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAAS 192

  Fly   136 -------GKI-----FVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQ 188
                   |||     ||||:...:.:.||.:.||::|::.||:: ...:....||:.|::|.::.
Human   193 QGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKI-ITNRTGVSKGYGFVSFVNDV 256

  Fly   189 VVTDLLKTPKQKIAGKEV 206
            .|        |||.|.::
Human   257 DV--------QKIVGSQI 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	23/80 (29%)
		RRM2_hnRNPD_like	137..211	CDD:240775	22/75 (29%)
DAZ4	NP_001375413.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..27		7/27 (26%)
		RRM_DAZL	35..116	CDD:410073	24/81 (30%)
		PABP-1234	42..412	CDD:130689	50/235 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	163..192		0/28 (0%)
		RRM_DAZL	200..281	CDD:410073	23/76 (30%)
		Daz	407..427	CDD:408642
		Daz	431..451	CDD:408642
		Daz	455..475	CDD:408642
		Daz	479..499	CDD:408642
		Daz	503..523	CDD:408642
		Daz	527..547	CDD:408642
		Daz	551..571	CDD:408642
		Daz	575..595	CDD:408642
		Daz	599..619	CDD:408642
		Daz	623..643	CDD:408642
		Daz	647..667	CDD:408642
		Daz	671..691	CDD:408642

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910