Protein Alignment sqd and dazap1

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: XP_021335308.1
• Gene: dazap1 / 561459
• ZFINID: ZDB-GENE-070212-1
• Length: 469
• Species: Danio rerio
• Alignment Length: 347
• Identity: 102/347 - (29%)
• Similarity: 148/347 - (42%)
• Gaps: 85/347 - (24%)

  Fly    34 AAGSTNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRG 98
            |..||..:::..|..:|  |:..|||||||.|.||::.||::|.:|||:....:..|..|.:|||
Zfish     3 ALPSTTLATEMNSNLAG--DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRG 65

  Fly    99 FAFIVFTNTEAIDKVSAADEHIINSKKVDPK----------KAKARHG------------KIFVG 141
            |.|:.|.:...:..|.....|.::.:.:|||          |.:.:.|            |||||
Zfish    66 FGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVG 130

  Fly   142 GLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEV 206
            |:.....:.|::.||.:||.:.||.|.:|.:|.:.:||.||||::||.|...:......|.||:|
Zfish   131 GIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKV 195

  Fly   207 DVKRATPK----PENQMMGGMRGGPRGGMRGGRGGYGGRGGYNNQWDG------QGSYGGYG--- 258
            :||:|.|:    |....:|..:.|||..:....|           |..      |.|||..|
Zfish   196 EVKKAEPRDSKAPAPGQLGANQWGPRAIISAANG-----------WAAQPAPTWQQSYGPQGVWV 249

  Fly   259 ------GGYG-----GYGA------------------GGYG---DYYAGGYYNGYDYGYD-GYGY 290
                  .|||     |.||                  ||:|   .|...|:.....:||. |...
Zfish   250 STGQPLAGYGPPLPAGRGAPAQAPSPFNAFLVAAPPTGGFGAPQGYPQQGFSTQPQFGYSFGTPQ 314

  Fly   291 GGGFEGNGY----GGGGGGNMG 308
            |..|...|.    ...|.|.:|
Zfish   315 GDQFVAQGMPPPPATPGAGPLG 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	26/70 (37%)
		RRM2_hnRNPD_like	137..211	CDD:240775	31/73 (42%)
dazap1	XP_021335308.1	RRM1_DAZAP1	24..105	CDD:241018	29/80 (36%)
		RRM2_DAZAP1	127..202	CDD:240773	31/74 (42%)
		FtsK	<220..>430	CDD:332908	29/128 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810