Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001103930.1 | Gene: | hnrnpd / 560522 | ZFINID: | ZDB-GENE-070424-97 | Length: | 314 | Species: | Danio rerio |
Alignment Length: | 349 | Identity: | 135/349 - (38%) |
---|---|---|---|
Similarity: | 185/349 - (53%) | Gaps: | 59/349 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 GEDFT----KDVTADGPGSE--NGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKE 71
Fly 72 LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARH- 135
Fly 136 ----GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Fly 197 PKQKIAGKEVDVKRATPKPENQMMGGMRGGPRGGMRGGRGGY----GGRGGYNNQWDGQGSYGGY 257
Fly 258 -GGGYGGYGAGGYGDYYAGGYYNGYDY-GYDGYGYGGGFEGNGYGGGGGGNMGGGRGGPRGGGGP 320
Fly 321 KGGGGFNGGKQRGGGGRQQRHQPY 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 36/70 (51%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 27/73 (37%) | ||
hnrnpd | NP_001103930.1 | CBFNT | 3..54 | CDD:285369 | 16/48 (33%) |
RRM1_hnRNPD_like | 56..129 | CDD:241019 | 38/72 (53%) | ||
RRM2_hnRNPD | 140..214 | CDD:241027 | 27/73 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I8173 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 237 | 1.000 | Inparanoid score | I3348 |
OMA | 1 | 1.010 | - | - | QHG45859 | |
OrthoDB | 1 | 1.010 | - | - | D1055256at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001417 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_112757 | |
Panther | 1 | 1.100 | - | - | O | PTHR48033 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4769 |
SonicParanoid | 1 | 1.000 | - | - | X985 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.970 |