Protein Alignment sqd and hnrnpa2b1

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_001192271.1
• Gene: hnrnpa2b1 / 549680
• XenbaseID: XB-GENE-490993
• Length: 350
• Species: Xenopus tropicalis
• Alignment Length: 347
• Identity: 132/347 - (38%)
• Similarity: 179/347 - (51%)
• Gaps: 56/347 - (16%)

  Fly    51 QRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
            :::..||||:||||:||||..||:::.::|::....|..||.:.|||||.|:.|::.:.:|...|
 Frog     4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68

  Fly   116 ADEHIINSKKVDPKKAKARH-----------GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPF 169
            |..|.|:.:.|:||:|.||.           .|:||||:..:..:..::.||.::|.|..:|:..
 Frog    69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIIT 133

  Fly   170 DKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMM-------------G 221
            |||..:::||.|:|||....|..::......|.|...:|::|..|.|.|.:             |
 Frog   134 DKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEMQDVQNTRNSRGGNFGFG 198

  Fly   222 GMRG------GPRGGMRGGRGGY-GGRG---GYNNQWDGQ--GSYG---GYGGGYGGYGAG-GYG 270
            ..||      ||.|..||...|| ||||   |||....||  ||:|   |||||.||||.. |||
 Frog   199 DSRGGGNFGSGPGGNFRGSSDGYGGGRGYGDGYNGYGGGQSGGSFGGGPGYGGGRGGYGGSPGYG 263

  Fly   271 DYYAGGYYNGYDYGYDGYG---YGGGFEGNGYGG-----------GGGGNMGGGR--GGPRGGGG 319
            :...||...||..|||.||   ||||...|.:|.           ..|||.||.|  |||.|||.
 Frog   264 NQGGGGGGGGYGGGYDNYGGGNYGGGGSYNDFGNYNQQSSSYGPMKSGGNFGGNRSMGGPYGGGN 328

  Fly   320 PKGGGGFNGGKQRGGGGRQQRH 341
            ...|.|..||...||.|.:.|:
 Frog   329 YGPGSGSGGGSGGGGYGGRNRY 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	29/70 (41%)
		RRM2_hnRNPD_like	137..211	CDD:240775	23/73 (32%)
hnrnpa2b1	NP_001192271.1	RRM1_hnRNPA2B1	7..87	CDD:241206	34/79 (43%)
		RRM2_hnRNPA2B1	100..179	CDD:241025	24/78 (31%)
		HnRNPA1	294..319	CDD:288479	6/24 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000