Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001361674.1 | Gene: | Hnrnpa2b1 / 53379 | MGIID: | 104819 | Length: | 353 | Species: | Mus musculus |
Alignment Length: | 334 | Identity: | 121/334 - (36%) |
---|---|---|---|
Similarity: | 171/334 - (51%) | Gaps: | 51/334 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 QRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Fly 116 ADEHIINSKKVDPKKAKARH-----------GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPF 169
Fly 170 DKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMMGGMRGGPRGG---- 230
Fly 231 --MRGGRGGYGGRGGYNNQW--DGQGSYGGYGGGYGGYGAGGYGDYYAGGYYNGYDYGYDGYGYG 291
Fly 292 G---GFEGNGYGGG----GGGNMGGGR----------------------GGPRGGGGPKGGGGFN 327
Fly 328 GGKQRGGGG 336 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 29/70 (41%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 22/73 (30%) | ||
Hnrnpa2b1 | NP_001361674.1 | Nuclear localization signal. /evidence=ECO:0000255 | 9..15 | ||
RRM1_hnRNPA2B1 | 19..99 | CDD:410155 | 34/79 (43%) | ||
RRM2_hnRNPA2B1 | 112..191 | CDD:409995 | 23/78 (29%) | ||
Disordered. /evidence=ECO:0000250|UniProtKB:P22626 | 193..353 | 61/157 (39%) | |||
HnRNPA1 | 302..326 | CDD:402981 | 2/23 (9%) | ||
Nuclear targeting sequence. /evidence=ECO:0000250 | 308..347 | 13/39 (33%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |