Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011015.1 | Gene: | hnrnpdl / 496424 | XenbaseID: | XB-GENE-495016 | Length: | 297 | Species: | Xenopus tropicalis |
Alignment Length: | 326 | Identity: | 128/326 - (39%) |
---|---|---|---|
Similarity: | 181/326 - (55%) | Gaps: | 47/326 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 GAAGSTN-GSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRS 96
Fly 97 RGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHG-----KIFVGGLTTEISDEEIKTYF 156
Fly 157 GQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPK------P 215
Fly 216 ENQMMGGMRGGP--RGGMRGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGGYGAGGYGDYYAGGYY 278
Fly 279 NGYDYGYDGYGYGGGFEGNGYGGGGGGNMGGGRGGPRGGGGPKGGGGFNGGKQRGGGGRQQRHQP 343
Fly 344 Y 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 31/70 (44%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 31/73 (42%) | ||
hnrnpdl | NP_001011015.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..21 | 8/18 (44%) | |
RRM1_hnRPDL | 27..102 | CDD:410152 | 34/74 (46%) | ||
RRM2_hnRPDL | 112..186 | CDD:409998 | 31/73 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 192..224 | 12/32 (38%) | |||
Trnau1ap | 222..>278 | CDD:407550 | 25/62 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 85 | 1.000 | Domainoid score | I8054 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45859 | |
OrthoDB | 1 | 1.010 | - | - | D496221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001417 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR48033 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X985 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.030 |