Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
Alignment Length: | 360 | Identity: | 138/360 - (38%) |
---|---|---|---|
Similarity: | 176/360 - (48%) | Gaps: | 70/360 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 QSAASGQRDDD---------RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFA 100
Fly 101 FIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARH-----------GKIFVGGLTTEISDEEIKT 154
Fly 155 YFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKP--EN 217
Fly 218 QMMGGMRGGPRGGMRGGRG----GYGGRGGYNNQ-----WDGQGSYGGY---GGGYGGYGAGGYG 270
Fly 271 DY-----YAGGYYNGYDYGYDGY------GYGGG-----FEGNGYGGGGGG-------------- 305
Fly 306 ----NMGGGRGGPRGGGGPKGGGGFNGGKQRGGGG 336 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 30/70 (43%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 28/73 (38%) | ||
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 34/76 (45%) |
RRM_SF | 116..188 | CDD:302621 | 26/71 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45463963 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 114 | 1.000 | Inparanoid score | I1542 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.890 |