Protein Alignment sqd and CG2931

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_649552.1
• Gene: CG2931 / 40673
• FlyBaseID: FBgn0037342
• Length: 302
• Species: Drosophila melanogaster
• Alignment Length: 89
• Identity: 24/89 - (26%)
• Similarity: 43/89 - (48%)
• Gaps: 1/89 - (1%)

  Fly    53 DDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN-TEAIDKVSAA 116
            |||.::|.|.|..:..::.|...|.|:...:...|..|.:||:|:||.|:.|.. .:.|..:...
  Fly   195 DDDFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVSFREPADFIRAMKEM 259

  Fly   117 DEHIINSKKVDPKKAKARHGKIFV 140
            |...:.|:.:..:|:..|...:.|
  Fly   260 DGRYVGSRPIKLRKSTWRQRSLDV 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	18/71 (25%)
		RRM2_hnRNPD_like	137..211	CDD:240775	1/4 (25%)
CG2931	NP_649552.1	RRM_RBM42	192..274	CDD:240829	21/78 (27%)
		RRM	<194..>280	CDD:223796	23/84 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464023
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930