Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998467.1 | Gene: | hnrnpabb / 406594 | ZFINID: | ZDB-GENE-040426-2516 | Length: | 309 | Species: | Danio rerio |
Alignment Length: | 330 | Identity: | 137/330 - (41%) |
---|---|---|---|
Similarity: | 186/330 - (56%) | Gaps: | 33/330 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDN-QSAASGQRDDDRKLFVGGLS 64
Fly 65 WETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPK 129
Fly 130 KA----KARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
Fly 191 TDLLKTPKQKIAGKEVDVKRATPKP-ENQMMGGMRGGPRGGMRGGRGGYG--GRGGYNNQWDGQG 252
Fly 253 SYGGYGGGYGGYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGNGYGGGGGGNMGGGRGGPRGG 317
Fly 318 GGPKG 322 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 32/70 (46%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 32/73 (44%) | ||
hnrnpabb | NP_998467.1 | CBFNT | 2..45 | CDD:285369 | 14/54 (26%) |
RRM1_hnRNPAB | 46..120 | CDD:241201 | 35/73 (48%) | ||
RRM_SF | 125..204 | CDD:302621 | 33/78 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I8173 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 237 | 1.000 | Inparanoid score | I3348 |
OMA | 1 | 1.010 | - | - | QHG45859 | |
OrthoDB | 1 | 1.010 | - | - | D496221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001417 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR48033 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4769 |
SonicParanoid | 1 | 1.000 | - | - | X985 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.110 |