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Protein Alignment sqd and cocoon
DIOPT Version :9
Sequence 1: | NP_731825.1 |
Gene: | sqd / 41666 |
FlyBaseID: | FBgn0263396 |
Length: | 344 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001261874.1 |
Gene: | cocoon / 39665 |
FlyBaseID: | FBgn0036496 |
Length: | 318 |
Species: | Drosophila melanogaster |
Alignment Length: | 194 |
Identity: | 58/194 - (29%) |
Similarity: | 98/194 - (50%) |
Gaps: | 22/194 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 SSDN--QSAASGQRDDDR----KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGF 99
|.|| .|.|..:|.:.. .|.|.|||:.|||::||::|..||::....:|.|.::|.|:||
Fly 86 SEDNLENSTAKTKRTEAHLRCFDLIVLGLSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSKGF 150
Fly 100 AFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKAR------HGKIFVGGLTTEISDEEIKTYFGQ 158
.|:.|.:.: :.....:..|.|:.:..:.|...:| .||:|||..|.:|..::::.||.:
Fly 151 GFVRFGSYD-VQMHVLSKRHSIDGRWCEVKVPASRGMGNQEPGKVFVGRCTEDIEADDLREYFSK 214
Fly 159 FGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPK---PENQM 219
||.:::|.:| ...:.|.|:|| .:..|..::...|..|.|..|.|..|..| .:||:
Fly 215 FGEVIDVFIP-----KPFRAFSFVTF-LDPYVPRVVCGEKHIIKGVSVHVSTADKKNVQNKNQL 272
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR48033 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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