Protein Alignment sqd and slirp

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_001292541.1
• Gene: slirp / 368358
• ZFINID: ZDB-GENE-030729-30
• Length: 103
• Species: Danio rerio
• Alignment Length: 85
• Identity: 27/85 - (31%)
• Similarity: 46/85 - (54%)
• Gaps: 4/85 - (4%)

  Fly    57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHII 121
            ::||..:.|....||::::||::|:::...:..|.:||..|||.:|.||..|.:......|.|||
Zfish    14 EVFVTKVPWTVATKEVKEYFGQFGQVKRCLLPLDKETGFHRGFCWIGFTTEEGLQNALQKDPHII 78

  Fly   122 NSKKVDPKKAKARHGKIFVG 141
            ...|:..:|.:    |.|.|
Zfish    79 EGAKLQVQKNR----KPFSG 94

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763	23/70 (33%)
		RRM2_hnRNPD_like	137..211	CDD:240775	3/5 (60%)
slirp	NP_001292541.1	RRM_SLIRP	14..86	CDD:409688	23/71 (32%)