Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006241030.1 | Gene: | Dazap1 / 362836 | RGDID: | 1305280 | Length: | 406 | Species: | Rattus norvegicus |
Alignment Length: | 414 | Identity: | 120/414 - (28%) |
---|---|---|---|
Similarity: | 161/414 - (38%) | Gaps: | 130/414 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 SGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Fly 114 SAADEHIINSKKVDPK----------KAKARHG-------------KIFVGGLTTEISDEEIKTY 155
Fly 156 FGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMM 220
Fly 221 GGMRGGPRGGMR-------GGRG--------GYGGRGGYNNQWDGQG-SYGGYG----------- 258
Fly 259 -------------GGY-------GGYGAG-----GYG------DYYA-----------GGYYNGY 281
Fly 282 -------------------DYGYDGYGYGGGFEGNGYGGGGGGNMGGGRGGPR--GGGGPKGGGG 325
Fly 326 FNGGKQRGGGGRQQRH-----QPY 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 27/70 (39%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 31/73 (42%) | ||
Dazap1 | XP_006241030.1 | RRM1_DAZAP1 | 11..92 | CDD:409988 | 30/80 (38%) |
RRM2_DAZAP1 | 111..190 | CDD:409765 | 33/78 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |