Protein Alignment sqd and Hrb27C

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Alignment Length: 370
• Identity: 110/370 - (29%)
• Similarity: 159/370 - (42%)
• Gaps: 93/370 - (25%)

  Fly    51 QRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
            :.|:..||||||||||||::.|..:|.::|:|....|..:.::||||||.|:.|.:...::.|..
  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66

  Fly   116 ADEHIINSKKVDPK--------KAKARHG-KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDK 171
            ...|.::.:.:|||        |.|...| |:|:|||.:.:::.:::|:|.::|.:.||.:.:|:
  Fly    67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQ 131

  Fly   172 QKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPK---------------------- 214
            :|.:.:||.|::|:.|..|..:.......:.||:|::|:|.|:
  Fly   132 EKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGN 196

  Fly   215 ----------PENQMMG--GMRGGPRGGMRGG----RGGYGGRG--------GYNNQWDGQGSYG 255
                      |.|.|.|  |..|||...|..|    ..||.|.|        ||.|  .|.|||.
  Fly   197 ECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGN--SGPGSYQ 259

  Fly   256 GYGGGYGGYGAGGYGDYYAGGY----YNGYDYGYDGYGYGGGFEGNGYGGGGGG---------NM 307
            |:|...|..|.......|||..    |.|||.      |.....|...|..|||         |.
  Fly   260 GWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDM------YNSTSTGAPSGPSGGGSWNSWNMPPNS 318

  Fly   308 GGGRGGPRGG----------------GGPKGGGGFNGGKQRGGGG 336
            .|..|.|..|                |||...|.. ||..|.|.|
  Fly   319 AGPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPV-GGMPRTGPG 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	27/70 (39%)
		RRM2_hnRNPD_like	137..211	CDD:240775	22/73 (30%)
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	30/80 (38%)
		RRM2_DAZAP1	94..173	CDD:240773	24/78 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464022
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740