Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997752.2 | Gene: | hnrnpaba / 321466 | ZFINID: | ZDB-GENE-030131-185 | Length: | 340 | Species: | Danio rerio |
Alignment Length: | 380 | Identity: | 149/380 - (39%) |
---|---|---|---|
Similarity: | 204/380 - (53%) | Gaps: | 80/380 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 AENKQVDTEINGEDFTKDVTADGPGSE-NGD--AGAAGS--TNGSSDNQSAASGQRD------DD 55
Fly 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Fly 121 INSKKVDPKKAKARH----GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCF 181
Fly 182 ITFDSEQVVTDLLKTPKQKI------AGKE--VDVKRATPKP--ENQMMGGMRGGPRGGMRGGRG 236
Fly 237 -GYGGRG-----GYNNQWD---GQGSYGGYGG--GYGGYGAGGYGDY-YAGGYYNGYDYGYDGYG 289
Fly 290 YGGGFEGNGYGGGGGGNMGGGRGGPRGGGGPKGGGGFNGGKQRGGGGRQQRHQPY 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 35/70 (50%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 33/81 (41%) | ||
hnrnpaba | NP_997752.2 | CBFNT | 1..69 | CDD:285369 | 20/64 (31%) |
RRM1_hnRNPAB | 70..144 | CDD:241201 | 38/73 (52%) | ||
RRM2_hnRNPAB | 149..228 | CDD:241028 | 30/78 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I8173 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 237 | 1.000 | Inparanoid score | I3348 |
OMA | 1 | 1.010 | - | - | QHG45859 | |
OrthoDB | 1 | 1.010 | - | - | D496221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001417 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR48033 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4769 |
SonicParanoid | 1 | 1.000 | - | - | X985 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.070 |