Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006250724.1 | Gene: | Hnrnpdl / 305178 | RGDID: | 1309950 | Length: | 419 | Species: | Rattus norvegicus |
Alignment Length: | 344 | Identity: | 132/344 - (38%) |
---|---|---|---|
Similarity: | 182/344 - (52%) | Gaps: | 59/344 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 ADGPGS-------ENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKY 79
Fly 80 GEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHG-----KIF 139
Fly 140 VGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGK 204
Fly 205 EVDVKRATPKPENQMMGGMRGGPRGGMRGGRGGYGGRG---------GYNNQWDGQGSYGGYGGG 260
Fly 261 YGGYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGNGYGGGGGGNMGGGRGGPRGGGGPKGGGG 325
Fly 326 FNGGKQRGGGGRQQRHQPY 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 31/70 (44%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 32/73 (44%) | ||
Hnrnpdl | XP_006250724.1 | RRM1_hnRPDL | 149..224 | CDD:410152 | 34/74 (46%) |
RRM2_hnRPDL | 234..308 | CDD:409998 | 32/73 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I8052 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 222 | 1.000 | Inparanoid score | I3446 |
OMA | 1 | 1.010 | - | - | QHG45859 | |
OrthoDB | 1 | 1.010 | - | - | D496221at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001417 | |
OrthoInspector | 1 | 1.000 | - | - | otm46028 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR48033 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X985 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 12.040 |