Protein Alignment sqd and DAZAP1

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: XP_011526206.1
• Gene: DAZAP1 / 26528
• HGNCID: 2683
• Length: 550
• Species: Homo sapiens
• Alignment Length: 463
• Identity: 131/463 - (28%)
• Similarity: 175/463 - (37%)
• Gaps: 170/463 - (36%)

  Fly    24 GPGSENGDAGAAGSTNGSSDNQSA-ASG----------QRDDDRKLFVGGLSWETTEKELRDHFG 77
            |||:..|    ||||...:.:..| .||          :....||||||||.|.||::.||.:|.
Human   114 GPGACMG----AGSTPQETWSLGAPCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFS 174

  Fly    78 KYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPK----------KAK 132
            :|||:....:..|..|.:||||.|:.|.:...:..|.|:..|.::.:.:|||          :.:
Human   175 QYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTR 239

  Fly   133 ARHG-------------KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITF 184
            .:.|             ||||||:.....:.|::.||.:||.:.||.|.:|.:|.:.:||.||||
Human   240 PKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 304

  Fly   185 DSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMMGGMRGGPRGGMR-------GGRG------ 236
            :.||.|...:......|.||:|:||||.|:.......|..|..:.|.|       |..|
Human   305 EDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTW 369

  Fly   237 --GYGGRGGYNNQWDGQG-SYGGYG------------------------GGY-------GGYGAG 267
              |||.:|    .|...| :.||||                        ||:       .||||.
Human   370 QQGYGPQG----MWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAP 430

  Fly   268 -----GYG------DYYAG----------------------------------------GYYNGY 281
                 |||      |.:|.                                        |.|.|
Human   431 PQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAG- 494

  Fly   282 DYGYDGYGYGGGF-----EGNGYGGGGGGNMGGGRGGPRGGGGPKGGGGFNGGKQRGGGGRQQRH 341
             ||.|..|:|.||     :...|         ||...|..||.|.||.||         ||.|.|
Human   495 -YGQDLSGFGQGFSDPSQQPPSY---------GGPSVPGSGGPPAGGSGF---------GRGQNH 540

  Fly   342 -----QPY 344
                 .||
Human   541 NVQGFHPY 548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	27/70 (39%)
		RRM2_hnRNPD_like	137..211	CDD:240775	31/73 (42%)
DAZAP1	XP_011526206.1	RRM	<151..341	CDD:223796	66/189 (35%)
		RRM1_DAZAP1	154..235	CDD:241018	30/80 (38%)
		RRM2_DAZAP1	254..333	CDD:240773	33/78 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.810