Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593531.1 | Gene: | gar2 / 2542869 | PomBaseID: | SPAC140.02 | Length: | 500 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 364 | Identity: | 95/364 - (26%) |
---|---|---|---|
Similarity: | 144/364 - (39%) | Gaps: | 106/364 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRK-------- 57
Fly 58 ----------------LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN 106
Fly 107 TEAIDKVSAA------DEHIINSKKVDPKK------AKARHGK-----------IFVGGLTTEIS 148
Fly 149 DEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATP 213
Fly 214 KPENQMMGGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGGYGAGGYGDYYAGGYY 278
Fly 279 NGYDYGYDGYGYGGGFEGNGYGGGGGGNMGGGRGGPRGG 317 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 25/76 (33%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 20/84 (24%) | ||
gar2 | NP_593531.1 | RRM1_gar2 | 264..339 | CDD:240893 | 25/74 (34%) |
RRM2_gar2 | 368..439 | CDD:240894 | 20/70 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 114 | 1.000 | Inparanoid score | I1542 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
3 | 2.920 |