Protein Alignment sqd and RBMY1F

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_689798.1
• Gene: RBMY1F / 159163
• HGNCID: 23974
• Length: 496
• Species: Homo sapiens
• Alignment Length: 139
• Identity: 49/139 - (35%)
• Similarity: 71/139 - (51%)
• Gaps: 19/139 - (13%)

  Fly   132 KARH-GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITF----DSEQVVT 191
            :|.| ||:|:|||..|.:::.:|..||:.|.|.||.:..|: .|:.:||.||||    |::....
Human     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAK 66

  Fly   192 DLLKTPKQKIAGKEVDVKRATPKPENQMMGGMR--------GGPRGGMRGGRGGYGGRGGYNNQW 248
            |:..|   .:.||.:.|::| .||..| .||.|        ..|.|.:|..||..||..|:....
Human    67 DMNGT---SLHGKAIKVEQA-KKPSFQ-SGGRRRPPASSRNRSPSGSLRSARGSSGGTRGWLPSH 126

  Fly   249 DGQGSYGGY 257
            :|....|||
Human   127 EGHLDDGGY 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763
		RRM2_hnRNPD_like	137..211	CDD:240775	27/77 (35%)
RBMY1F	NP_689798.1	RRM_RBMX_like	7..85	CDD:409816	29/82 (35%)
		ELAV_HUD_SF	<10..>182	CDD:273741	45/132 (34%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	81..345		19/57 (33%)
		dnaA	158..>316	CDD:455861
		RBM1CTR	174..218	CDD:400429
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	452..496