Protein Alignment sqd and Rbp6

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: XP_061499213.1
• Gene: Rbp6 / 1277242
• VectorBaseID: AGAMI1_006135
• Length: 383
• Species: Anopheles gambiae
• Alignment Length: 285
• Identity: 97/285 - (34%)
• Similarity: 136/285 - (47%)
• Gaps: 61/285 - (21%)

  Fly    28 ENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQ 92
            :|.|.|.     ...:||:...   :|..|:|:|||||:|:.:.|||:|.|:|||..:.|..||.
Mosquito     4 QNQDLGV-----HPGNNQAEVP---NDPGKMFIGGLSWQTSPESLRDYFSKFGEITEVMVMKDPT 60

  Fly    93 TGRS------------------RGFAFIVFTNTEAIDKVSAADEHIINSKKVDPK---------K 130
            |.||                  |||.||.|.:..::|||.|...|.::.||:|||         |
Mosquito    61 TRRSSSSAMGLADSSAPLYSRPRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAFPRRAHPK 125

  Fly   131 AKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195
            ...|..|||||||:...:.|::|:||.|||.|.:..:.||||.::.:||.|:||.||.||..:.:
Mosquito   126 MVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 190

  Fly   196 TPKQKIAGKEVDVKRATPK----PENQMMGGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGSYGG 256
            ....:|..|.|:.|:|.||    |.|.               .:....|||.|:..|       .
Mosquito   191 IHFHEINNKMVECKKAQPKEVMLPANL---------------AKTRTAGRGTYDFMW-------S 233

  Fly   257 YGGGYGGYGAGGYGDYYAGGYYNGY 281
            .|....|:.|..|..|.||..::||
Mosquito   234 LGTLPDGFPAAAYAAYAAGRGFSGY 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763	35/88 (40%)
		RRM2_hnRNPD_like	137..211	CDD:240775	32/73 (44%)
Rbp6	XP_061499213.1	None