Protein Alignment sqd and LOC1270401

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: XP_061498152.1
• Gene: LOC1270401 / 1270401
• VectorBaseID: AGAMI1_013577
• Length: 417
• Species: Anopheles gambiae
• Alignment Length: 279
• Identity: 65/279 - (23%)
• Similarity: 102/279 - (36%)
• Gaps: 95/279 - (34%)

  Fly    49 SGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFT-NTEAIDK 112
            |..:.:...:|||.||.|...:.|::.|..:|:|....|..||||.:|:|:.|:.|. .|||.:.
Mosquito    89 SAIKQEHYHIFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENA 153

  Fly   113 VSA---------------------ADEHIINSKKV---------DPKKAKARHGKI---FVGGLT 144
            ::|                     |.::.||:|.:         .|.......|.|   ..|||.
Mosquito   154 IAAMNGQWLGSRSIRTNWATRKPPASKNEINAKPLTFDEVYNQSSPTNCTVYCGGIGGTLAGGLN 218

  Fly   145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL----------KTPK- 198
            .:|    ::..|..||.|.|:.:..|      ||:.|:.|.:::..|..:          :|.|
Mosquito   219 EDI----LQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVHNSEINSQTVKC 273

  Fly   199 --------------------------------QKIAG---KEVDVKRATPKP-----ENQMMGGM 223
                                            |::||   .......|||.|     :.|.:.||
Mosquito   274 SWGKESGDPNNAPSLASQALSQTGFPFNTAYGQQVAGYWYPPAPAYPATPAPAATPLQGQFLQGM 338

  Fly   224 RGGPRGGMRGGRGGYGGRG 242
            :|...|...|.:.||.|.|
Mosquito   339 QGYTYGQFAGYQQGYMGMG 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763	27/101 (27%)
		RRM2_hnRNPD_like	137..211	CDD:240775	21/122 (17%)
LOC1270401	XP_061498152.1	None