| Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001070733.1 | Gene: | Hnrnpd / 11991 | MGIID: | 101947 | Length: | 355 | Species: | Mus musculus |
| Alignment Length: | 321 | Identity: | 129/321 - (40%) |
|---|---|---|---|
| Similarity: | 178/321 - (55%) | Gaps: | 46/321 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 22 ADGP----GSENGDAG-AAGSTNGSS-------------------DNQS-----AASGQRDDDRK 57
Fly 58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIIN 122
Fly 123 SKKVDPKKAKARH-----GKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFI 182
Fly 183 TFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKP--ENQMMGGMRGGPRGGMRGGRGG--YGGRGG 243
Fly 244 YNNQWD-GQGSYG----GYGGGYGGYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGNGY 299 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 36/70 (51%) |
| RRM2_hnRNPD_like | 137..211 | CDD:240775 | 28/73 (38%) | ||
| Hnrnpd | NP_001070733.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..91 | 16/55 (29%) | |
| CBFNT | <60..78 | CDD:311868 | 1/17 (6%) | ||
| RRM1_hnRNPD_like | 99..172 | CDD:241019 | 38/72 (53%) | ||
| RRM2_hnRNPD | 183..257 | CDD:241027 | 28/73 (38%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 85 | 1.000 | Domainoid score | I8163 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 226 | 1.000 | Inparanoid score | I3473 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG45859 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0001417 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43940 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_112757 | |
| Panther | 1 | 1.100 | - | - | O | PTHR48033 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4769 |
| SonicParanoid | 1 | 1.000 | - | - | X985 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.960 | |||||