Protein Alignment sqd and hnrnpa3

DIOPT Version :9

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: XP_031748359.1
• Gene: hnrnpa3 / 100144993
• XenbaseID: XB-GENE-5878765
• Length: 385
• Species: Xenopus tropicalis
• Alignment Length: 341
• Identity: 129/341 - (37%)
• Similarity: 173/341 - (50%)
• Gaps: 45/341 - (13%)

  Fly    27 SENGDAGAAGSTNG----------------SSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDH 75
            |.:..||.|.:..|                |:|:|.....:.:..||||:||||:|||:..||:|
 Frog    48 SSSRSAGEAAAPFGRERCAMPRGAMDDHWPSTDDQGHEPKEPEQLRKLFIGGLSFETTDDSLREH 112

  Fly    76 FGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKA-----KARH 135
            |.::|::....|..||||.|||||.|:.::..|.:|...:|..|.::.:.|:||:|     .||.
 Frog   113 FEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSARP 177

  Fly   136 G------KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL 194
            |      ||||||:..:..:..::.||..:|.|..:|:..|:|..:::||.|:|||....|..::
 Frog   178 GAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 242

  Fly   195 KTPKQKIAGKEVDVKRATPKPENQMMGGMRGGPRGGMRG-GRGGYGGRGGYNNQWDGQGSYGGYG 258
            ......|.|...:||:|..|.|.|.....|||..||..| |..||||..||.||.      ||||
 Frog   243 VQKYHTINGHNCEVKKALSKQEMQTASAQRGGNYGGGPGYGGRGYGGSPGYGNQG------GGYG 301

  Fly   259 GGYGGYGAGGYGDYYAGGYYNGYDY----GYDG-----YG--YGGGFEGNGYGGGGGGNMGGGRG 312
            ||..|.|.|||..|..||.:.|.:|    .|.|     ||  .||.|.|...||.|.|..|||.|
 Frog   302 GGGSGGGGGGYDGYNEGGNFGGGNYNDFGNYGGQQQSNYGPMKGGSFSGRSSGGSGSGPYGGGYG 366

  Fly   313 GPRGGGGPKGGGGFNG 328
            ...||||..|||.:.|
 Frog   367 SGGGGGGGGGGGSYGG 382

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM_SF	58..129	CDD:302621	30/70 (43%)
		RRM2_hnRNPD_like	137..211	CDD:240775	24/73 (33%)
hnrnpa3	XP_031748359.1	RRM1_hnRNPA_like	94..171	CDD:409992	34/76 (45%)
		RRM2_hnRNPA3	184..263	CDD:409996	25/78 (32%)
		HnRNPA1	328..>344	CDD:402981	4/15 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910