Protein Alignment sqd and zcrb1

DIOPT Version :10

• Sequence 1: NP_731825.1
• Gene: sqd / 41666
• FlyBaseID: FBgn0263396
• Length: 344
• Species: Drosophila melanogaster
• Sequence 2: NP_001107973.1
• Gene: zcrb1 / 100135752
• XenbaseID: XB-GENE-999756
• Length: 215
• Species: Xenopus tropicalis
• Alignment Length: 179
• Identity: 45/179 - (25%)
• Similarity: 78/179 - (43%)
• Gaps: 30/179 - (16%)

  Fly    58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD-EHII 121
            ::|..|.:..|..:|...|.|||::..:.:..|..:.||:|.||::|     :||.|:.: ...:
 Frog    12 VYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRRSKGVAFVLF-----LDKESSQNCVRGL 71

  Fly   122 NSKKVDPKKAKARHGKIFV-GGLTTEI------SDEEIKTYFGQFGNIV---------EVEMPFD 170
            |:|::..:..||   .|.: .|..||.      :|:......|..|::.         |.|.|..
 Frog    72 NNKQLFGRAIKA---SIAIDNGRATEFIRRRNYTDKSRCYECGDTGHLSYACPKNMLGEREPPQK 133

  Fly   171 KQKSQRKGF----CFITFDSEQVVTD-LLKTPKQKIAGKEVDVKRATPK 214
            |:|.:||..    .|...:||....| .|.:..|.||.::..::....|
 Frog   134 KEKKKRKKIVEAEVFEEDESEDEGEDPALDSLSQAIAFQQARIEEEKNK 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqd	NP_731825.1	RRM1_hnRNPA_hnRNPD_like	58..129	CDD:409763	20/71 (28%)
		RRM2_hnRNPD_like	137..211	CDD:240775	22/94 (23%)
zcrb1	NP_001107973.1	RRM_ZCRB1	9..84	CDD:409827	22/79 (28%)
		PTZ00368	<97..123	CDD:173561	3/25 (12%)