Sequence 1: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009303812.1 | Gene: | msi2a / 100002680 | ZFINID: | ZDB-GENE-030826-25 | Length: | 407 | Species: | Danio rerio |
Alignment Length: | 400 | Identity: | 124/400 - (31%) |
---|---|---|---|
Similarity: | 167/400 - (41%) | Gaps: | 114/400 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 DAGAAGSTNGS-SDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTG 94
Fly 95 RSRGFAFIVFTNTEAIDKVSAADEHIINSKKVDPK---------KAKARHGKIFVGGLTTEISDE 150
Fly 151 EIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKP 215
Fly 216 ENQMMGGMRGGPRG------------GMRG--------GRGGYGGRGGYNNQWDG--QGSYG--- 255
Fly 256 --------GYG------GGYGGY--GAG-GYGDYYAGGYYNG-----------YDYGYDGYGYG- 291
Fly 292 ----------------------------------GGFEGNGYGGG-----GGGNMGGGRGGPRGG 317
Fly 318 GGPKGGGGFN 327 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 35/70 (50%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 28/73 (38%) | ||
msi2a | XP_009303812.1 | RRM | <2..162 | CDD:223796 | 70/166 (42%) |
RRM1_MSI | 23..97 | CDD:241020 | 37/73 (51%) | ||
RRM2_MSI | 111..184 | CDD:240769 | 27/72 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |