DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and Fcrla

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001153687.1 Gene:Fcrla / 98752 MGIID:2138647 Length:353 Species:Mus musculus


Alignment Length:279 Identity:55/279 - (19%)
Similarity:85/279 - (30%) Gaps:114/279 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RDDAVYMVLWFREGD--GEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIRI 162
            :|..:..|:::|||.  |.|                       |.::.||.|.         ::.
Mouse   114 QDWPLTQVIFYREGSALGPP-----------------------GPKSEFSITM---------VQK 146

  Fly   163 EDEGVYRCRVDFRN---------SPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVESFSEGNDI 218
            .|.|.|.|...||:         ||     :.:||......||:       ||.......||..:
Mouse   147 SDGGHYHCSGIFRSPGPGSREAASP-----VAITV
QELFAAPVL-------KALPSSEPQEGGSV 199

  Fly   219 VLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTI------NHLSYPNVGRQHLNSRLMCVAS 277
            .|||:..         ..|..:|....|....||:::      :.|..|....:|..| ..|.| 
Mouse   200 TLSCQTK---------LALQRSASRLLFSFYKDGRSLSVRGVSSELKIPKASEEHSGS-YWCEA- 253

  Fly   278 NTNLTPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLKKL 342
                                     :|:||.:|             .:.|.|..|   .:.|:|.
Mouse   254 -------------------------VTEDRQIS-------------K
QSPQLEIW---VQALQKP 277

  Fly   343 TKNFNEPDNQSLSILTFTP 361
            |.: ..|..::|..|...|
Mouse   278 TAS-ETPPTEALGPLPPPP 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 19/98 (19%)
IG_like 80..188 CDD:214653 19/98 (19%)
Ig 210..281 CDD:299845 16/76 (21%)
Ig 319..392 CDD:299845 10/43 (23%)
IG_like 319..383 CDD:214653 10/43 (23%)
IG_like 412..489 CDD:214653
IGc2 413..478 CDD:197706
Ig_3 509..572 CDD:290638
fn3 593..675 CDD:278470
FcrlaNP_001153687.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..66
Ig 90..176 CDD:299845 19/98 (19%)
IG_like 102..>154 CDD:214653 14/71 (20%)
Ig_3 182..253 CDD:290638 19/87 (22%)
IG_like 189..262 CDD:214653 20/121 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..311 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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