| Sequence 1: | NP_001034052.2 | Gene: | side-IV / 41657 | FlyBaseID: | FBgn0038156 | Length: | 1001 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_008762179.2 | Gene: | Skint8 / 689792 | RGDID: | 1588696 | Length: | 362 | Species: | Rattus norvegicus |
| Alignment Length: | 190 | Identity: | 48/190 - (25%) |
|---|---|---|---|
| Similarity: | 75/190 - (39%) | Gaps: | 45/190 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 77 PLTTVQGVLGRQAMLPCDISPQERDDAVYM-VLWFREGDGEPIYNFDVRGRQFGQARLWSSPTAF 140
Fly 141 GTRAHFSSTT---HPAQLKIDNIRIEDEGVYRCRVDFRNS---PTRNLKINLTVIVPPDRPVIYG 199
Fly 200 QNR--HEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTINH 257 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-IV | NP_001034052.2 | V-set | 79..188 | CDD:462230 | 34/115 (30%) |
| Ig | 210..281 | CDD:472250 | 9/48 (19%) | ||
| Ig strand B | 218..222 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 232..236 | CDD:409353 | 0/3 (0%) | ||
| Ig | <317..392 | CDD:472250 | |||
| Ig strand C | 329..333 | CDD:409353 | |||
| Ig strand E | 355..359 | CDD:409353 | |||
| Ig strand F | 369..374 | CDD:409353 | |||
| Ig strand G | 385..388 | CDD:409353 | |||
| Ig | 411..479 | CDD:472250 | |||
| Ig strand B | 417..421 | CDD:409353 | |||
| Ig strand C | 431..435 | CDD:409353 | |||
| Ig strand E | 454..458 | CDD:409353 | |||
| Ig strand F | 468..473 | CDD:409353 | |||
| Ig | 494..576 | CDD:472250 | |||
| Ig strand B | 511..515 | CDD:409353 | |||
| Ig strand C | 525..529 | CDD:409353 | |||
| Ig strand E | 551..555 | CDD:409353 | |||
| Ig strand F | 566..570 | CDD:409353 | |||
| fn3 | 593..675 | CDD:394996 | |||
| Skint8 | XP_008762179.2 | IgV_MOG_like | 30..141 | CDD:409378 | 35/116 (30%) |
| FR1 | 30..51 | CDD:409378 | 7/17 (41%) | ||
| Ig strand A | 30..33 | CDD:409378 | 48/190 (25%) | ||
| Ig strand A' | 36..40 | CDD:409378 | 1/3 (33%) | ||
| Ig strand B | 43..51 | CDD:409378 | 4/7 (57%) | ||
| CDR1 | 52..60 | CDD:409378 | 1/9 (11%) | ||
| Ig strand C | 60..65 | CDD:409378 | 2/4 (50%) | ||
| FR2 | 61..65 | CDD:409378 | 1/3 (33%) | ||
| CDR2 | 66..84 | CDD:409378 | 7/22 (32%) | ||
| Ig strand C' | 70..78 | CDD:409378 | 2/9 (22%) | ||
| Ig strand C' | 79..82 | CDD:409378 | 1/2 (50%) | ||
| FR3 | 86..126 | CDD:409378 | 12/41 (29%) | ||
| Ig strand D | 93..98 | CDD:409378 | 2/4 (50%) | ||
| Ig strand E | 104..112 | CDD:409378 | 2/7 (29%) | ||
| Ig strand F | 119..127 | CDD:409378 | 5/9 (56%) | ||
| CDR3 | 127..129 | CDD:409378 | 0/1 (0%) | ||
| Ig strand G | 129..141 | CDD:409378 | 1/11 (9%) | ||
| FR4 | 130..141 | CDD:409378 | 1/10 (10%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||